PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_4AL_3E11167D9.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 262aa    MW: 28979.2 Da    PI: 8.7227
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_4AL_3E11167D9.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY59.27.7e-19224262138
                            ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEE CS
                   WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkv 38 
                            ++Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+v
  Traes_4AL_3E11167D9.1 224 MNDGCQWRKYGQKISKGNPCPRAYYRCTIAtGCPVRKQV 262
                            58***************************99*******8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.0E-19209262IPR003657WRKY domain
SuperFamilySSF1182907.72E-17217262IPR003657WRKY domain
PROSITE profilePS5081120.094219262IPR003657WRKY domain
SMARTSM007746.0E-9224262IPR003657WRKY domain
PfamPF031063.8E-16225262IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    Send to blast
MIKGDQRQLG GHEERLNNEI RDDHQASDGN FFKFLQNQSS SKKEAQEDKI ASTRAEMGEV  60
RKENERLKAM LSRMVDDHRT LQKQFDVLHQ QGRGKNLAVG SAEHTSLVDG VKDPRFISLR  120
LGTSTGTSKH NYMGEEIKGN TNNPDDIAVG ARTDGGEIKV RPDVVTLSPG GSSEEEAAET  180
TTTSVASKTE KNPRSTDSED DVAQQPLAKK ARVSVRARCD TPTMNDGCQW RKYGQKISKG  240
NPCPRAYYRC TIATGCPVRK QV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015643469.16e-90PREDICTED: probable WRKY transcription factor 72 isoform X2
TrEMBLW5DNA80.0W5DNA8_WHEAT; Uncharacterized protein
STRINGMLOC_60283.11e-143(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50473862
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18860.13e-34WRKY DNA-binding protein 61
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]